MTcomplex: plot the (putative) functional impact of mutations to ETP...

In MTseeker: Bioconductor Tools for Human Mitochondrial Variant Analysis

Description

Tim Vickers created a beautiful illustration of the mitochondrial electron transport chain, and that's where coding mitochondrial DNA mutations will usually hit (we aren't plotting the mitoribosome or tRNAs just yet). So why reinvent the wheel (and possibly make it square)?

Usage

MTcomplex(variants, defColor = "#c9eded", verbose = FALSE)

Arguments

variants	an MVRanges or MVRangesList
defColor	default color (#c9eded is standard)
verbose	be verbose, for debugging? (FALSE)

Value

invisibly, the temporary file to which the SVG was written

Examples

library(MTseekerData)
data(RONKSvariants) 
MTcomplex(RONKSvariants$RO_1)

MTseeker documentation built on Oct. 31, 2019, 3:20 a.m.