MTcomplex: plot the (putative) functional impact of mutations to ETP...

Description Usage Arguments Value Examples

View source: R/MTcomplex.R

Description

Tim Vickers created a beautiful illustration of the mitochondrial electron transport chain, and that's where coding mitochondrial DNA mutations will usually hit (we aren't plotting the mitoribosome or tRNAs just yet). So why reinvent the wheel (and possibly make it square)?

Usage

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MTcomplex(variants, defColor = "#c9eded", verbose = FALSE)

Arguments

variants

an MVRanges or MVRangesList

defColor

default color (#c9eded is standard)

verbose

be verbose, for debugging? (FALSE)

Value

invisibly, the temporary file to which the SVG was written

Examples

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library(MTseekerData)
data(RONKSvariants) 
MTcomplex(RONKSvariants$RO_1)

MTseeker documentation built on Oct. 31, 2019, 3:20 a.m.