byStrand: simple helper function to split a *RangesList by the strand...
In MTseeker: Bioconductor Tools for Human Mitochondrial Variant Analysis
Description
Usage
Arguments
Value
Examples
Description
If presented with a GAlignments/MAlignments, this method will split the
element by strand, i.e. + alignments and - alignments. Otherwise the method
retrieves ranges/variant calls that overlap genic elements on the heavy and
light strands of the mitochondrial genome.
Usage
1
Arguments
x
a *Ranges[List] or *Alignments[List]
anno
optional feature annotation, will use mtAnno.rCRS if NULL
Value
elements of x over features on each strand OR x split by strand
Examples
1
2
MTseeker documentation built on Oct. 31, 2019, 3:20 a.m.
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Description Usage Arguments Value Examples
Description
If presented with a GAlignments/MAlignments, this method will split the element by strand, i.e. + alignments and - alignments. Otherwise the method retrieves ranges/variant calls that overlap genic elements on the heavy and light strands of the mitochondrial genome.
Usage
1 |
Arguments
x |
a *Ranges[List] or *Alignments[List] |
anno |
optional feature annotation, will use mtAnno.rCRS if NULL |
Value
elements of x over features on each strand OR x split by strand
Examples
1 2 |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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