GolubTrain: Golub Training Set

In MantelCorr: Compute Mantel Cluster Correlations

Description

Samples were taken with Affymetrix Hgu6800 chips and expression levels measured on 7,129 genes (probes). The samples consist of 27 acute lymphoblastic leukemia (ALL) and 11 acute myeloid luekemia (AML) patients. The data values are raw (e.g. no standardization or gene filtering applied).

Usage

data(GolubTrain)

Format

A data frame of 7129 observations (genes) with the following 38 variables (samples):

X1

ALL

X2

ALL

X3

ALL

X4

ALL

X5

ALL

X6

ALL

X7

ALL

X8

ALL

X9

ALL

X10

ALL

X11

ALL

X12

ALL

X13

ALL

X14

ALL

X15

ALL

X16

ALL

X17

ALL

X18

ALL

X19

ALL

X20

ALL

X21

ALL

X22

ALL

X23

ALL

X24

ALL

X25

ALL

X26

ALL

X27

ALL

X28

AML

X29

AML

X30

AML

X31

AML

X32

AML

X33

AML

X34

AML

X35

AML

X36

AML

X37

AML

X38

AML

Source

http://www.broad.mit.edu/cgi-bin/cancer/datasets.cgi

References

Golub, T.R. Molecular Classification of Cancer: Class Discovery and Class Prediction by Gene Expression Monitoring. Science, vol 286, 531-537, 1999.

Examples

data(GolubTrain)

Example output

MantelCorr documentation built on Nov. 8, 2020, 4:58 p.m.