NBSpliceRes-GetDSResults: Get differential expression results of significant genes.

In NBSplice: Negative Binomial Models to detect Differential Splicing

Description

GetDSResults returns the results obtained for those genes identified as differentially spliced.

Usage

GetDSResults(myNBRes, adjusted = TRUE, p.value = 0.05)

## S4 method for signature 'NBSpliceRes'
GetDSResults(myNBRes, adjusted = TRUE,
    p.value = 0.05)

Arguments

myNBRes	NBSpliceRes class object.
adjusted	Logical indicating if adjusted p values should be used.
p.value	Numeric value between 0 and 1 giving the required family-wise error rate or false discovery rate.

Value

data.frame with the results obtainted by means of the NBTest method

Note

see full example in NBSpliceRes-class

Author(s)

Gabriela A. Merino [e-mail] and Elmer A. Fernandez [e-mail]

See Also

NBSpliceRes

Other NBSpliceRes: GetDSGenes, GetGeneResults, NBSpliceRes-class, NBSpliceRes-initialize, NBSpliceRes, myDSResults, plotGeneResults, plotRatiosDisp, plotVolcano

Examples

data(myDSResults, package="NBSplice")

myDSResultsDF<-GetDSResults(myDSResults)

NBSplice documentation built on Nov. 8, 2020, 8:07 p.m.