NBSpliceRes-plotRatiosDisp: Plot the dispersion of isoform's relative expression for...

Description Usage Arguments Value Note Author(s) See Also Examples

Description

plotRatiosDisp returns a ggplot object with the scatter plot of isoform's relative expression in the contrasted conditions. Isoforms are colored according to the differential splicing status of the gene where they come from.

Usage

1
2
3
4
5
plotRatiosDisp(myNBRes, adjusted = TRUE, p.value = 0.05)

## S4 method for signature 'NBSpliceRes'
plotRatiosDisp(myNBRes, adjusted = TRUE,
    p.value = 0.05)

Arguments

myNBRes

NBSpliceRes class object.

adjusted

Logical indicating if adjusted p values should be used.

p.value

Numeric value between 0 and 1 giving the required family-wise error rate or false discovery rate.

Value

A ggplot object.

Note

see full example in NBSpliceRes-class

Author(s)

Gabriela A. Merino merino.gabriela33@gmail.com and Elmer A. Fernandez efernandez@bdmg.com.ar

See Also

NBSpliceRes

Other NBSpliceRes: GetDSGenes, GetDSResults, GetGeneResults, NBSpliceRes-class, NBSpliceRes-initialize, NBSpliceRes, myDSResults, plotGeneResults, plotVolcano

Examples

1
2
3
4
5
6
data(myDSResults, package="NBSplice")

g<-plotRatiosDisp(myDSResults)
if(interactive()){
g
}

NBSplice documentation built on Nov. 8, 2020, 8:07 p.m.