NBSpliceRes-constructor: NBSpliceRes constructor
In NBSplice: Negative Binomial Models to detect Differential Splicing

Description Usage Arguments Value Note Author(s) See Also Examples

NBSpliceRes creates an object to store the results of differential expression analysis performed by the NBTest function.

1	NBSpliceRes(results, lowExpIndex, contrast, dispersion)

`results`	Data.frame with NBTest results of expressed isoforms.
`lowExpIndex`	Numeric indicating the positions of low expressed isoforms.
`contrast`	Character indicating the contrast used for NBTest.
`dispersion`	Numeric with the estimated gene dispersions.

NBSpliceRes object.

see full example in NBSpliceRes-class

Gabriela A. Merino merino.gabriela33@gmail.com, and Elmer A. Fernandez efernandez@bdmg.com.ar

NBSpliceRes-class

Other NBSpliceRes: GetDSGenes, GetDSResults, GetGeneResults, NBSpliceRes-class, NBSpliceRes-initialize, myDSResults, plotGeneResults, plotRatiosDisp, plotVolcano

data(myDSResults, package="NBSplice")
myResults<-results(myDSResults, filter=FALSE)
myLowExpIdx<-lowExpIndex(myDSResults)
myContrast<-contrast(myDSResults)
myDispersion<-disp(myDSResults)
myNewDSResults<-NBSpliceRes(myResults, myLowExpIdx, myContrast, myDispersion)