Files in NanoMethViz
Visualise methlation data from Oxford Nanopore sequencing
NEWS.md
README.md
NanoMethViz documentation built on Nov. 8, 2020, 4:51 p.m.
NAMESPACE
DESCRIPTION
build/vignette.rds
src/utils.cpp
src/Makevars.win
src/RcppExports.cpp
src/convert_methy_to_dss.h
src/convert_methy_to_dss.cpp
src/utils.h
src/zstr/strict_fstream.h
src/zstr/zstr.h
src/zstr/zstr.hpp
R/plot_agg_regions.R
R/query_exons.R
R/convert_methy_format.R
R/plot_region.R
R/plot_gene_annotation.R
R/RcppExports.R
R/plot_grange.R
R/utils.R
R/NanoMethViz-package.R
R/methy_to_bsseq.R
R/bsseq_to_edger.R
R/plot_methylation.R
R/col_specs.R
R/NanoMethResults.R
R/tabix_utils.R
R/get_exons.R
R/lollipop.R
R/plot_gene.R
R/query_methy.R
vignettes/ImportingData.Rmd
vignettes/Introduction.Rmd
man/get_exons_homo_sapiens.Rd
man/convert_methy_format.Rd
man/bsseq_to_edger.Rd
man/exons.Rd
man/get_exons_mus_musculus.Rd
man/plot_grange.Rd
man/methy_col_names.Rd
man/plot_region.Rd
man/methy.Rd
man/query_methy.Rd
man/load_example_nanomethresult.Rd
man/query_exons.Rd
man/methy_to_bsseq.Rd
man/sort_methy_file.Rd
man/create_tabix_file.Rd
man/samples.Rd
man/plot_gene.Rd
man/NanoMethViz-package.Rd
man/raw_methy_to_tabix.Rd
man/bsseq_to_log_methy_ratio.Rd
man/plot_agg_regions.Rd
man/plot_agg_regions_sample_grouped.Rd
man/NanoMethResult-class.Rd
inst/methy_subset.tsv.bgz.tbi
inst/methy_subset.tsv.bgz
inst/sample2_nanopolish.tsv.gz
inst/sample1_nanopolish.tsv.gz
inst/dmr_subset.tsv.gz
inst/doc/ImportingData.Rmd
inst/doc/ImportingData.R
inst/doc/Introduction.R
inst/doc/Introduction.Rmd
inst/doc/ImportingData.html
inst/doc/Introduction.html
