RocheBT: mRNA expression data downsampled from GSE28490 (Roche)

In OVESEG: OVESEG-test to detect tissue/cell-specific markers

Description

Three cell subtypes (B cells, CD4+ T cells, CD8+ T cells) were isolated from 5 pools of 5 healthy donors each. RNA obtained from these 15 purified populations were subsequently used for mRNA expression profiling by HG-U133Plus2.0 microarrays. We downsample the original data to 5000 probes/probesets. Subtype labels for purified populations are also included. (Data generation script can be found in ./data_raw folder.)

Usage

data(RocheBT)

Format

A list with one expression matrix (y) and a categorical vector giving subtypes (group).

References

Allantaz et al. PLoS One 2012;7(1):e29979. PMID: 22276136

OVESEG documentation built on Nov. 8, 2020, 4:51 p.m.