CMoptions: 'CMoptions'

In Onassis: OnASSIs Ontology Annotation and Semantic SImilarity software

Description

This constructor creates an object of type CMoptions

Usage

CMoptions(SearchStrategy = "CONTIGUOUS_MATCH",
  CaseMatch = "CASE_INSENSITIVE", Stemmer = "NONE",
  StopWords = "NONE", OrderIndependentLookup = "ON",
  FindAllMatches = "YES", SynonymType = "ALL", paramValueIndex = NA)

Arguments

SearchStrategy	The matching strategy for finding concepts in the input text CONTIGUOUS_MATCHLongets match of contiguous tokens within enclosing span SKIP_ANY_MATCHLongest match of not-necessarily contiguous tokens SKIP_ANY_MATCH_ALLOW_OVERLAPLongest match of not-necessarily contiguous tokens, overlapping matches are allowed
CaseMatch	CASE_IGNOREFold everything to lowercase for matching CASE_INSENSITIVEFold only tokens with initial caps to lowercase CASE_FOLD_DIGITSFold all (and only) tokens with a digit CASE_SENSITIVEPerform no case folding
Stemmer	BIOLEMMATIZER A stemmer specific for biomedical literature PORTER A stemmer that removes the commoner morphological and inflexional endings from words in English NONE No word stemming
StopWords	PUBMED A list of stop words obtained analyzing Pubmed papers NONE No stop words
OrderIndependentLookup	ON Ordering within span is ignored (i.e. 'Breast cancer' would equal 'Cancer breast') OFF Ordering is taken into consideration
FindAllMatches	YES All the matches within the span are found NO Only the longest match within the span will be returned
SynonymType	EXACT_ONLY Only exact synonyms are considered ALL All synonym types are included
paramValueIndex	An integer value to index the 576 parameter combinations

Value

instance of the class CMoptions set to the default combination of parameters

Examples

op <- CMoptions()

Onassis documentation built on Nov. 8, 2020, 8:18 p.m.