organism_types: 'organism_types'
In Onassis: OnASSIs Ontology Annotation and Semantic SImilarity software
Description
Usage
Arguments
Value
Examples
Description
This method retrierves the allowed organisms in GEOmetadb
Usage
1
organism_types(geo_con)
Arguments
geo_con
connection to the SQLite GEOmetadb databse
Value
A character vector with all the possible organism values
Examples
1
2
3
4
5
6
if(file.exists('GEOmetadb.sqlite')){
geo_con <- connectToGEODB('GEOmetadb.sqlite')
species <- organism_types(geo_con)
}else{
print('You need to download GEOmetadb.sqlite to run this example')
}
Onassis documentation built on Nov. 8, 2020, 8:18 p.m.
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Description Usage Arguments Value Examples
Description
This method retrierves the allowed organisms in GEOmetadb
Usage
1 | organism_types(geo_con)
|
Arguments
geo_con |
connection to the SQLite GEOmetadb databse |
Value
A character vector with all the possible organism values
Examples
1 2 3 4 5 6 | if(file.exists('GEOmetadb.sqlite')){
geo_con <- connectToGEODB('GEOmetadb.sqlite')
species <- organism_types(geo_con)
}else{
print('You need to download GEOmetadb.sqlite to run this example')
}
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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