groupwiseConfigRef: 'groupwiseConfigRef'

In Onassis: OnASSIs Ontology Annotation and Semantic SImilarity software

Description

This method shows the value of the groupwise configuration used to compute semantic similarities between groups of concepts.

Sets the groupwise measure to the reference of a groupwise measure to the semantic similarity between groups of concepts. For available meausres see the groupConfig function's details.

Usage

groupwiseConfigRef(object)

groupwiseConfigRef(object) <- value

## S4 method for signature 'Similarity'
groupwiseConfigRef(object)

## S4 replacement method for signature 'Similarity'
groupwiseConfigRef(object) <- value

Arguments

object	instance of class Similarity-class
value	one of the groupwise measures. See groupConfig

Value

groupwise configured measure for the similarity object provided as input

instance of the Similarity class with the new grouprwise option.

Examples

sim <- new('Similarity')
groupwiseConfigRef(sim)
sim <- new('Similarity')
obo <- system.file('extdata', 'sample.cs.obo', package='OnassisJavaLibs')
groupwiseConfigRef(sim) <- 'ui'

Onassis documentation built on Nov. 8, 2020, 8:18 p.m.