Description Details Slots Examples
EntityFinder is a class that wraps a Conceptmapper pipeline using the CCP UIMA Type System https://github.com/UCDenver-ccp/ccp-nlp. The pipeline includes a sentence detector, offset tokenizer and retrieves concepts from dictionaries built from OBO/OWL formatted ontology files.
The following methods can be applied to EntityFinder
findEntities
annotateDF
The methods can be automatically called using the function
EntityFinder
typeSystemRef
The reference to the Java object representing the type system
1 | finder <- new('EntityFinder')
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