Wrapper function for gene expression statistics preprocessing for SODEGIR analysis.
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An object of class ExpressionSet containing gene expression input data
Using an ExpressionSet object as input, statistics for differential expression are computed comparing each sample with the reference group.
The output is returned as a matrix.
Silvio Bicciato, Roberta Spinelli, Mattia Zampieri, Eleonora Mangano, Francesco Ferrari, Luca Beltrame, Ingrid Cifola, Clelia Peano, Aldo Solari, and Cristina Battaglia. A computational procedure to identify significant overlap of differentially expressed and genomic imbalanced regions in cancer datasets. Nucleic Acids Res, 37(15):5057-70, August 2009.
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