checkSeqDb: checkSeqDb
In RCAS: RNA Centric Annotation System
Description
Usage
Arguments
Value
Examples
View source: R/report_functions.R
Description
Given a string that denotes a genome version (e.g. hg19)
returns the BSgenome object matching the genome version
that are available in BSgenome::available.genomes()
Usage
1
checkSeqDb(genomeVersion)
Arguments
genomeVersion
String that denotes genome version.
To unambigously select a BSgenome object, provide a string
that matches the end of the available genomes at:
BSgenome::available.genomes().
Value
Returns a BSgenome object that uniquely matches the
genomeVersion.
Examples
1
checkSeqDb('hg19')
RCAS documentation built on Nov. 8, 2020, 8:03 p.m.
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Description Usage Arguments Value Examples
View source: R/report_functions.R
Description
Given a string that denotes a genome version (e.g. hg19) returns the BSgenome object matching the genome version that are available in BSgenome::available.genomes()
Usage
1 | checkSeqDb(genomeVersion)
|
Arguments
genomeVersion |
String that denotes genome version. To unambigously select a BSgenome object, provide a string that matches the end of the available genomes at: BSgenome::available.genomes(). |
Value
Returns a BSgenome object that uniquely matches the genomeVersion.
Examples
1 | checkSeqDb('hg19')
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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