getTxdbFeaturesFromGRanges: getTxdbFeaturesFromGRanges

Description Usage Arguments Value Examples

Description

This function takes as input a GRanges object that contains GTF file contents (e.g from the output of importGtf function). Then extracts the coordinates of gene features such as promoters, introns, exons, 5'/3' UTRs and whole transcripts.

Usage

1

Arguments

gffData

A GRanges object imported by importGtf function

Value

A list of GRanges objects

Examples

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data(gff)
txdbFeatures <- getTxdbFeaturesFromGRanges(gffData = gff)

RCAS documentation built on April 29, 2020, 5:38 a.m.