getMotifSummaryTable: getMotifSummaryTable
In RCAS: RNA Centric Annotation System

Description Usage Arguments Value Examples

Get summary stats for top discovered motifs

1	getMotifSummaryTable(motifResults)

motifResults

Output object of runMotifDiscovery function

A data.frame object containing summary statistics about the discovered motifs

data(queryRegions)
motifResults <- runMotifDiscovery(queryRegions = queryRegions[1:1000],
                                  genomeVersion = 'hg19',
                                  resize = 15,
                                  motifN = 1,
                                  maxMismatch = 1,
                                  nCores = 2)
motifSummary <- getMotifSummaryTable(motifResults)