getAllEdges: getAllEdges

Description Usage Arguments Value Author(s) Examples

Description

Retrieve all edges in the current graph, expressed in the standard Cytoscape notation.

Usage

1

Arguments

obj

a CytoscapeWindowClass object.

Value

A list of character strings.

Author(s)

Tanja Muetze, Georgi Kolishovski, Paul Shannon

Examples

 1
 2
 3
 4
 5
 6
 7
 8
 9
10
  ## Not run: 
  # first, delete existing windows to save memory:
  deleteAllWindows(CytoscapeConnection())

  cw <- CytoscapeWindow ('getAllEdges.test', graph=makeSimpleGraph())
  displayGraph (cw)
  print (getAllEdges (cw))
    # [1] "A (phosphorylates) B"   "B (synthetic lethal) C" "C (undefined) A"    

## End(Not run)

RCy3 documentation built on May 31, 2017, 11:49 a.m.

Search within the RCy3 package
Search all R packages, documentation and source code