importNetworkFromNDEx: Import Network From NDEx

In RCy3: Functions to Access and Control Cytoscape

Description

Import a network from the NDEx database into Cytoscape.

Usage

importNetworkFromNDEx(
  ndex.id,
  username = NULL,
  password = NULL,
  accessKey = NULL,
  base.url = .defaultBaseUrl
)

Arguments

ndex.id	Network externalId provided by NDEx. This is not the same as a Cytoscape SUID.
username	(optional) NDEx account username; required for private content
password	(optional) NDEx account password; required for private content
accessKey	(optional) NDEx accessKey; alternate acccess to private content
base.url	(optional) Ignore unless you need to specify a custom domain, port or version to connect to the CyREST API. Default is http://localhost:1234 and the latest version of the CyREST API supported by this version of RCy3.

Value

(integer) SUID of imported network

Examples

importNetworkFromNDEx(ndex.id)

RCy3 documentation built on Nov. 21, 2020, 2 a.m.