RNAprobR: An R package for analysis of massive parallel sequencing based RNA structure probing data

This package facilitates analysis of Next Generation Sequencing data for which positional information with a single nucleotide resolution is a key. It allows for applying different types of relevant normalizations, data visualization and export in a table or UCSC compatible bedgraph file.

Package details

AuthorLukasz Jan Kielpinski [aut], Nikos Sidiropoulos [cre, aut], Jeppe Vinther [aut]
Bioconductor views Coverage GenomeAnnotation Normalization Sequencing
MaintainerNikos Sidiropoulos <nikos.sidiro@gmail.com>
LicenseGPL (>=2)
Version1.22.0
Package repositoryView on Bioconductor
Installation Install the latest version of this package by entering the following in R:
if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("RNAprobR")

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RNAprobR documentation built on Nov. 8, 2020, 5:57 p.m.