addReportColumns-methods | Decorate the Basic data.frame Representation of an Object |
BaseReportType-class | Class '"BaseReport"' |
CSVFile | Function for creating and initializing a CSVFile for... |
CSVFile-class | Class '"CSVFile"' |
custHeaderPanel | Define a header panel with custom JS/CSS for a Shiny app |
DataPackage | Function for creating and initializing an object of class... |
DataPackage-class | Class '"DataPackage"' |
filename-methods | Methods for getting the name of a file for a CSVFile or... |
finish-methods | Finalizing reports after publishing results |
HTMLReport | Creating and initializing an HTMLReport object |
HTMLReport-class | Class '"HTMLReport"' |
HTMLReportRef-class | Class '"HTMLReportRef"' |
Link | Create a table of Links |
makeDESeqDF | Converts DESeq results into a data frame to be published |
mockRnaSeqData | A counts table of mock RNA-deq data in mouse. |
objectToHTML-methods | Transform R objects into HTML form to be inserted in HTML... |
publish-methods | Methods for publishing a variety of data types in selected... |
readReport | Read in an Existing Report |
ReportHandlers-class | Class '"ReportHandlers"' |
reporting.theme | Color theme for use in ReportingTools |
reporting.theme.alternate | Alternate color theme for use in ReportingTools |
toReportDF-methods | Class Specific Default Behavior for Transforming Objects to... |
validConnection | Determine connection validity |
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