Description Usage Arguments Value Author(s) See Also Examples
This function can be used to visualise the (rank) correlation in expression data between different samples or sample groups.
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eset |
object of class |
samples |
which samples' expression shall be correlated to each
other; either a numeric vector of sample numbers in the
|
grouping |
an optional factor vector defining if the correlation should be assessed between groups of samples, rather than individual samples. If two or more samples are assigned into the same group, the mean over these samples' expression values is taken before computing correlation. Default NULL means assess correlation between individual samples only. |
ref |
reference than only applies if argument |
useSmoothScatter |
logical; should the function
|
... |
additional arguments, not used yet |
The function only returns NULL (invisible). The function is called for its side-effect producing the pairs plot.
Joern Toedling
ExpressionSet
,
relevel
,
pairs
,
smoothScatter
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