Files in Rmagpie
MicroArray Gene-expression-based Program In Error rate estimation
LICENSE.txt
NAMESPACE
DESCRIPTION
build/vignette.rds
data/vV70genesDataset.rda
R/result2LayerCV-accessors.R
R/loadData-methods.R
R/rateGenes.R
R/resultRepeated1LayerCV-accessors.R
R/experiment-accessors.R
R/geneSubsets-accessors.R
R/two_layer_ext_CV.R
R/setValidity-methods.R
R/show-methods.R
R/AllGenerics.R
R/runTwoLayerExtCV-methods.R
R/initialize-methods.R
R/user_interface.R
R/thresholds-accessors.R
R/classifyNewSamples.R
R/featureSelectionOptions-accessors.R
R/runOneLayerExtCV-methods.R
R/AllClasses.R
R/rfe.R
R/one_layer_ext_CV.R
R/non_linear_svm.R
R/typeValidity.R
R/finalClassifier-accessors.R
R/tool_case.R
demo/demoPlots.r
demo/demoCV.R
demo/demoClassifyNewSample.R
demo/00Index
vignettes/literature.bib
vignettes/Magpie_examples.Rnw
man/finalClassifier-class.Rd
man/show-methods.Rd
man/vV70genes.Rd
man/classifyNewSamples-methods.Rd
man/plotErrorsRepeatedOneLayerCV.rd
man/setFeatureSelectionOptions-methods.Rd
man/thresholds-class.Rd
man/runOneLayerExtCV-methods.Rd
man/experiment-class.Rd
man/plotErrorsFoldTwoLayerCV-methods.Rd
man/getResults-methods.Rd
man/featureSelectionOptions-class.Rd
man/getFinalClassifier.Rd
man/getDataset-methods.Rd
man/setDataset-methods.Rd
man/rankedGenesImg-methods.Rd
man/runTwoLayerExtCV-methods.Rd
man/plotErrorsSummaryOneLayerCV-methods.rd
man/initialize-methods.Rd
man/getFeatureSelectionOptions-methods.Rd
man/geneSubsets-class.Rd
man/findFinalClassifier-methods.Rd
inst/doc/Magpie_examples.R
inst/doc/Magpie_examples.pdf
inst/doc/Magpie_examples.Rnw
inst/extdata/vV_newSamples.txt
inst/extdata/raw_geneExpr.txt
inst/extdata/raw_classes.txt
