Man pages for Rmagpie
MicroArray Gene-expression-based Program In Error rate estimation
| classifyNewSamples-methods | classifyNewSamples Method to classify new samples for a given... |
| experiment-class | assessment: A central class to perform one and two layers of... |
| featureSelectionOptions-class | "featureSelectionOptions": A virtual class to store the... |
| finalClassifier-class | finalClassifier: A class to store the final classifier... |
| findFinalClassifier-methods | findFinalClassifier Method to train and build the final... |
| geneSubsets-class | geneSubsets: A class to handle the sizes of gene susbets to... |
| getDataset-methods | getDataset Method to access the attributes of a dataset from... |
| getFeatureSelectionOptions-methods | getFeatureSelectionOptions Method to access the attributes of... |
| getFinalClassifier | getFinalClassifier Method to access the attributes of a... |
| getResults-methods | getResults Method to access the result of one-layer and... |
| initialize-methods | Initialize objects of class from Rmagpie |
| plotErrorsFoldTwoLayerCV-methods | plotErrorsFoldTwoLayerCV Method to plot the error rate of a... |
| plotErrorsRepeatedOneLayerCV | plotErrorsRepeatedOneLayerCV Method to plot the estimated... |
| plotErrorsSummaryOneLayerCV-methods | plotErrorsSummaryOneLayerCV Method to plot the summary... |
| rankedGenesImg-methods | rankedGenesImg Method to plot the genes according to their... |
| runOneLayerExtCV-methods | runOneLayerExtCV: Method to run an external one-layer... |
| runTwoLayerExtCV-methods | runTwoLayerExtCV: Method to run an external two-layers... |
| setDataset-methods | getDataset<- Method to modify the attributes of a dataset... |
| setFeatureSelectionOptions-methods | getFeatureSelectionOptions<- Method to modify the attributes... |
| show-methods | show Display the object, by printing, plotting or whatever... |
| thresholds-class | thresholds: A class to handle the thresholds to be tested... |
| vV70genes | vV70genes: van't Veer et al. 70 best genes in an object of... |
