S4Vectors: S4 implementation of vectors and lists

The S4Vectors package defines the Vector and List virtual classes and a set of generic functions that extend the semantic of ordinary vectors and lists in R. Package developers can easily implement vector-like or list-like objects as concrete subclasses of Vector or List. In addition, a few low-level concrete subclasses of general interest (e.g. DataFrame, Rle, and Hits) are implemented in the S4Vectors package itself (many more are implemented in the IRanges package and in other Bioconductor infrastructure packages).

AuthorH. Pag├Ęs, M. Lawrence and P. Aboyoun
Date of publicationNone
MaintainerBioconductor Package Maintainer <maintainer@bioconductor.org>
LicenseArtistic-2.0
Version0.12.1

View on Bioconductor

Functions

active Man page
active<- Man page
active<-,FilterRules-method Man page
active,FilterRules-method Man page
aggregate Man page
aggregate,data.frame-method Man page
aggregate,List-method Man page
aggregate,matrix-method Man page
aggregate-methods Man page
aggregate,Rle-method Man page
aggregate,ts-method Man page
aggregate.Vector Man page
aggregate,Vector-method Man page
Annotated Man page
Annotated-class Man page
anyDuplicated.NSBS Man page
anyDuplicated,NSBS-method Man page
anyDuplicated,RangeNSBS-method Man page
<=,ANY,Vector-method Man page
<,ANY,Vector-method Man page
==,ANY,Vector-method Man page
>=,ANY,Vector-method Man page
>,ANY,Vector-method Man page
!=,ANY,Vector-method Man page
append,FilterRules,FilterRules-method Man page
append,Rle,vector-method Man page
append,vector,Rle-method Man page
append,Vector,Vector-method Man page
as.character,Vector-method Man page
as.complex,Vector-method Man page
as.data.frame,DataFrame-method Man page
as.data.frame,List-method Man page
as.data.frame,Pairs-method Man page
as.data.frame,Rle-method Man page
as.data.frame.Vector Man page
as.data.frame,Vector-method Man page
as.double,Vector-method Man page
as.env Man page
as.env,DataTable-method Man page
as.env,NULL-method Man page
as.env,Vector-method Man page
as.factor,Rle-method Man page
as.integer,NativeNSBS-method Man page
as.integer,RangeNSBS-method Man page
as.integer,Vector-method Man page
as.list,List-method Man page
as.list,Rle-method Man page
as.list,SimpleList-method Man page
as.list.Vector Man page
as.list,Vector-method Man page
as.logical,Vector-method Man page
as.matrix,DataFrame-method Man page
as.matrix,HitsList-method Man page
as.matrix,Hits-method Man page
as.numeric,Vector-method Man page
as.raw,Vector-method Man page
as.table,HitsList-method Man page
as.table,Hits-method Man page
as.vectorORfactor Man page
as.vectorORfactor,Rle-method Man page
as.vector,Rle-method Man page
breakTies Man page
by,DataTable-method Man page
.Call2 Man page
cbind,DataFrame-method Man page
cbind,DataTable-method Man page
cbind,FilterMatrix-method Man page
cbind,List-method Man page
c,FilterRules-method Man page
characterORNULL Man page
characterORNULL-class Man page
chartr,ANY,ANY,Rle-method Man page
c,Hits-method Man page
class:characterORNULL Man page
class:DataFrame Man page
class:DataTable Man page
class:DataTableORNULL Man page
class:expressionORfunction Man page
class:FilterRules Man page
class:Hits Man page
class:HitsList Man page
class:List Man page
classNameForDisplay Man page
classNameForDisplay,ANY-method Man page
classNameForDisplay,AsIs-method Man page
classNameForDisplay,Hits-method Man page
classNameForDisplay,SelfHits-method Man page
classNameForDisplay,SimpleList-method Man page
class:NSBS Man page
class:Pairs Man page
class:Rle Man page
class:SelfHits Man page
class:SelfHitsList Man page
class:SimpleList Man page
class:SortedByQueryHits Man page
class:SortedByQueryHitsList Man page
class:SortedByQuerySelfHits Man page
class:SortedByQuerySelfHitsList Man page
class:Vector Man page
class:vectorORfactor Man page
coerce,ANY,AsIs-method Man page
coerce,ANY,DataFrame-method Man page
coerce,ANY,List-method Man page
coerce,ANY,SimpleList-method Man page
coerce,ANY,vector-method Man page
coerce,AsIs,DataFrame-method Man page
coerce,character,Rle-method Man page
coerce,complex,Rle-method Man page
coerce,data.frame,DataFrame-method Man page
coerce,DataFrame,data.frame-method Man page
coerce,data.table,DataFrame-method Man page
coerce,factor,Rle-method Man page
coerce,function,FilterClosure-method Man page
coerce,Hits,SortedByQueryHits-method Man page
coerce,integer,DataFrame-method Man page
coerce,integer,List-method Man page
coerce,integer,Rle-method Man page
coerce,list,DataFrame-method Man page
coerce,List,data.frame-method Man page
coerce,list,List-method Man page
coerce,List,list-method Man page
coerce,logical,Rle-method Man page
coerce,matrix,DataFrame-method Man page
coerce,NULL,DataFrame-method Man page
coerce,numeric,Rle-method Man page
coerce,Pairs,DataFrame-method Man page
coerce,raw,Rle-method Man page
coerce,Rle,character-method Man page
coerce,Rle,complex-method Man page
coerce,Rle,data.frame-method Man page
coerce,Rle,factor-method Man page
coerce,Rle,integer-method Man page
coerce,Rle,list-method Man page
coerce,Rle,logical-method Man page
coerce,Rle,numeric-method Man page
coerce,Rle,raw-method Man page
coerce,Rle,vector-method Man page
coerce,SimpleList,DataFrame-method Man page
coerce,standardGeneric,FilterClosure-method Man page
coerce,table,DataFrame-method Man page
coerce,Vector,character-method Man page
coerce,Vector,complex-method Man page
coerce,vector,DataFrame-method Man page
coerce,Vector,data.frame-method Man page
coerce,Vector,DataFrame-method Man page
coerce,Vector,double-method Man page
coerce,Vector,factor-method Man page
coerce,Vector,integer-method Man page
coerce,Vector,logical-method Man page
coerce,Vector,numeric-method Man page
coerce,Vector,raw-method Man page
coerce,vector,Rle-method Man page
coerce,Vector,vector-method Man page
coerce,xtabs,DataFrame-method Man page
colnames<-,DataFrame-method Man page
colnames,DataFrame-method Man page
compare Man page
complete.cases,DataTable-method Man page
Complex,Rle-method Man page
cor,Rle,Rle-method Man page
countLnodeHits Man page
countLnodeHits,Hits-method Man page
countMatches Man page
countMatches,ANY,ANY-method Man page
countQueryHits Man page
countRnodeHits Man page
countRnodeHits,Hits-method Man page
countSubjectHits Man page
cov,Rle,Rle-method Man page
c,Pairs-method Man page
c,Rle-method Man page
c,SimpleList-method Man page
DataFrame Man page
DataFrame-class Man page
[<-,DataFrame-method Man page
[,DataFrame-method Man page
[[<-,DataFrame-method Man page
DataTable Man page
DataTable-class Man page
DataTableORNULL Man page
DataTableORNULL-class Man page
decode Man page
decode,ANY-method Man page
decode,Rle-method Man page
diff.Rle Man page
diff,Rle-method Man page
dim,DataTable-method Man page
dimnames<-,DataTable-method Man page
dimnames,DataTable-method Man page
duplicated.DataTable Man page
duplicated,DataTable-method Man page
duplicated,Rle-method Man page
duplicated.Vector Man page
duplicated,Vector-method Man page
elementLengths Man page
elementLengths,ANY-method Man page
elementMetadata Man page
elementMetadata<- Man page
elementMetadata<-,Vector-method Man page
elementMetadata,Vector-method Man page
elementNROWS Man page
elementNROWS,ANY-method Man page
elementNROWS,List-method Man page
elementType Man page
elementType,List-method Man page
elementType,vector-method Man page
endoapply Man page
endoapply,data.frame-method Man page
endoapply,list-method Man page
endoapply,List-method Man page
endoapply,SimpleList-method Man page
end,Rle-method Man page
eval,FilterRules,ANY-method Man page
evalSeparately Man page
evalSeparately,FilterRules-method Man page
expand Man page
expand,DataFrame-method Man page
expand,Vector-method Man page
expressionORfunction Man page
expressionORfunction-class Man page
extractROWS Man page
extractROWS,ANY,ANY-method Man page
extractROWS,classNameForDisplay,ANY-method Man page
extractROWS,Rle,ANY-method Man page
extractROWS,Rle,RangeNSBS-method Man page
extractROWS,vectorORfactor,RangeNSBS-method Man page
Filter,List-method Man page
FilterMatrix Man page
FilterMatrix-class Man page
[,FilterMatrix-method Man page
filterRules Man page
FilterRules Man page
FilterRules-class Man page
filterRules,FilterMatrix-method Man page
[,FilterRules-method Man page
[[<-,FilterRules-method Man page
Find,List-method Man page
findMatches Man page
findMatches,ANY,ANY-method Man page
findMatches,ANY,missing-method Man page
findRun Man page
findRun,Rle-method Man page
first Man page
first<- Man page
first<-,Pairs-method Man page
first,Pairs-method Man page
fold Man page
from Man page
from,Hits-method Man page
getListElement Man page
get_showHeadLines Man page
get_showTailLines Man page
gsub,ANY,ANY,Rle-method Man page
head Man page
head.DataTable Man page
head.Vector Man page
head,Vector-method Man page
Hits Man page
Hits-class Man page
Hits-comparison Man page
HitsList Man page
HitsList-class Man page
Hits-setops Man page
ifelse,ANY,ANY,Rle-method Man page
ifelse,ANY,Rle,ANY-method Man page
ifelse,ANY,Rle,Rle-method Man page
\%in\%,ANY,Vector-method Man page
\%in\%,Rle,ANY-method Man page
intersect,ANY,Rle-method Man page
intersect,Rle,ANY-method Man page
intersect,Rle,Rle-method Man page
intersect,Vector,Vector-method Man page
\%in\%,Vector,ANY-method Man page
\%in\%,Vector,Vector-method Man page
IQR,Rle-method Man page
isConstant Man page
isConstant,array-method Man page
isConstant,integer-method Man page
isConstant,numeric-method Man page
isEmpty Man page
isEmpty,ANY-method Man page
isEmpty,List-method Man page
is.na,DataTable-method Man page
is.na,Rle-method Man page
isRedundantHit Man page
isSelfHit Man page
isSingleInteger Man page
isSingleNumber Man page
isSingleNumberOrNA Man page
isSingleString Man page
isSingleStringOrNA Man page
isSorted Man page
isSorted,ANY-method Man page
isStrictlySorted Man page
isStrictlySorted,ANY-method Man page
isStrictlySorted,NSBS-method Man page
isStrictlySorted,RangeNSBS-method Man page
isTRUEorFALSE Man page
is.unsorted,Rle-method Man page
lapply,List-method Man page
lapply,SimpleList-method Man page
length,NSBS-method Man page
length,Pairs-method Man page
length,RangeNSBS-method Man page
length,Rle-method Man page
length,SimpleList-method Man page
lengths,Vector-method Man page
length,Vector-method Man page
levels.Rle Man page
levels<-,Rle-method Man page
levels,Rle-method Man page
List Man page
List-class Man page
[<-,List-method Man page
[,List-method Man page
[[<-,List-method Man page
[[,List-method Man page
$<-,List-method Man page
$,List-method Man page
List-utils Man page
mad.Rle Man page
mad,Rle-method Man page
Map,List-method Man page
match,Hits,Hits-method Man page
match,Pairs,Pairs-method Man page
match,Rle,ANY-method Man page
Math2,Rle-method Man page
Math,Rle-method Man page
mcols Man page
mcols<- Man page
mcols<-,Vector-method Man page
mcols,Vector-method Man page
mean.Rle Man page
mean,Rle-method Man page
median.Rle Man page
median,Rle-method Man page
mendoapply Man page
mendoapply,data.frame-method Man page
mendoapply,list-method Man page
mendoapply,List-method Man page
mendoapply,SimpleList-method Man page
merge Man page
merge,data.frame,DataTable-method Man page
merge,DataTable,data.frame-method Man page
merge,DataTable,DataTable-method Man page
merge,Vector,Vector-method Man page
metadata Man page
metadata<- Man page
metadata<-,Annotated-method Man page
metadata,Annotated-method Man page
na.exclude,DataTable-method Man page
names<-,Pairs-method Man page
names,Pairs-method Man page
names<-,SimpleList-method Man page
names,SimpleList-method Man page
na.omit,DataTable-method Man page
nchar,Rle-method Man page
ncol,DataFrame-method Man page
NCOL,DataTable-method Man page
new2 Man page
nLnode Man page
nLnode,Hits-method Man page
nnode Man page
nnode,SelfHits-method Man page
normalizeDoubleBracketSubscript Man page
normalizeSingleBracketReplacementValue Man page
normalizeSingleBracketReplacementValue,ANY-method Man page
normalizeSingleBracketSubscript Man page
nRnode Man page
nRnode,Hits-method Man page
nrow,DataFrame-method Man page
NROW,DataTable-method Man page
NROW,Vector-method Man page
nrun Man page
nrun,Rle-method Man page
NSBS Man page
NSBS,array-method Man page
NSBS,character-method Man page
NSBS-class Man page
NSBS,factor-method Man page
NSBS,logical-method Man page
NSBS,missing-method Man page
NSBS,NSBS-method Man page
NSBS,NULL-method Man page
NSBS,numeric-method Man page
Ops,Rle,Rle-method Man page
Ops,Rle,vector-method Man page
Ops,vector,Rle-method Man page
order,Hits-method Man page
order,Rle-method Man page
Pairs Man page
Pairs-class Man page
parallelSlotNames,Hits-method Man page
parallelSlotNames,Pairs-method Man page
parallelVectorNames Man page
parallelVectorNames,ANY-method Man page
parallelVectorNames,List-method Man page
params Man page
params,FilterClosure-method Man page
paste,Rle-method Man page
pc Man page
pcompare Man page
pcompare,Hits,Hits-method Man page
pmax.int,Rle-method Man page
pmax,Rle-method Man page
pmin.int,Rle-method Man page
pmin,Rle-method Man page
Position,List-method Man page
printAtomicVectorInAGrid Man page
quantile.Rle Man page
quantile,Rle-method Man page
queryHits Man page
queryHits,HitsList-method Man page
queryLength Man page
rank,Vector-method Man page
rbind,DataFrame-method Man page
rbind,DataTable-method Man page
rbind,FilterMatrix-method Man page
rbind,List-method Man page
recycleIntegerArg Man page
recycleNumericArg Man page
Reduce,List-method Man page
relistToClass Man page
relistToClass,ANY-method Man page
relistToClass,Hits-method Man page
relistToClass,SortedByQueryHits-method Man page
remapHits Man page
rename Man page
rename,vector-method Man page
rename,Vector-method Man page
rep.int,Rle-method Man page
replaceROWS Man page
replaceROWS,ANY-method Man page
replaceROWS,Vector-method Man page
rep,Rle-method Man page
revElements Man page
revElements,list-method Man page
revElements,List-method Man page
rev.Rle Man page
rev,Rle-method Man page
Rle Man page
Rle,ANY-method Man page
Rle-class Man page
!,Rle-method Man page
[<-,Rle-method Man page
[,Rle-method Man page
Rle,Rle-method Man page
Rle-runstat Man page
Rle-utils Man page
ROWNAMES Man page
ROWNAMES,ANY-method Man page
rownames<-,DataFrame-method Man page
rownames,DataFrame-method Man page
ROWNAMES,DataTable-method Man page
ROWNAMES,Vector-method Man page
runLength Man page
runLength<- Man page
runLength<-,Rle-method Man page
runLength,Rle-method Man page
runmean Man page
runmean,Rle-method Man page
runmed,Rle-method Man page
runq Man page
runq,Rle-method Man page
runsum Man page
runsum,Rle-method Man page
runValue Man page
runValue<- Man page
runValue<-,Rle-method Man page
runValue,Rle-method Man page
runwtsum Man page
runwtsum,Rle-method Man page
safeExplode Man page
sapply,List-method Man page
sd,Rle-method Man page
second Man page
second<- Man page
second<-,Pairs-method Man page
second,Pairs-method Man page
SelfHits Man page
SelfHits-class Man page
SelfHitsList Man page
SelfHitsList-class Man page
selfmatch Man page
selfmatch,ANY-method Man page
selfmatch,factor-method Man page
setdiff,ANY,Rle-method Man page
setdiff,Rle,ANY-method Man page
setdiff,Rle,Rle-method Man page
setdiff,Vector,Vector-method Man page
setequal,Vector,Vector-method Man page
setListElement Man page
setMethods Man page
setValidity2 Man page
shiftApply Man page
shiftApply-methods Man page
shiftApply,vector,vector-method Man page
shiftApply,Vector,Vector-method Man page
showAsCell Man page
showAsCell,ANY-method Man page
showAsCell,AsIs-method Man page
showAsCell,Rle-method Man page
showAsCell,Vector-method Man page
show,DataTable-method Man page
show,FilterClosure-method Man page
show,FilterMatrix-method Man page
show,Hits-method Man page
show,List-method Man page
show,Pairs-method Man page
show,RangeNSBS-method Man page
show,Rle-method Man page
SimpleList Man page
SimpleList-class Man page
smoothEnds,Rle-method Man page
SortedByQueryHits Man page
SortedByQueryHits-class Man page
SortedByQueryHitsList Man page
SortedByQueryHitsList-class Man page
SortedByQuerySelfHits Man page
SortedByQuerySelfHits-class Man page
SortedByQuerySelfHitsList Man page
SortedByQuerySelfHitsList-class Man page
sort,Rle-method Man page
sort.Vector Man page
sort,Vector-method Man page
space Man page
space,HitsList-method Man page
split Man page
split,ANY,Vector-method Man page
split,list,Vector-method Man page
split-methods Man page
split,Vector,ANY-method Man page
split,Vector,Vector-method Man page
start,Rle-method Man page
strsplitAsListOfIntegerVectors Man page
sub,ANY,ANY,Rle-method Man page
subjectHits Man page
subjectHits,HitsList-method Man page
subjectLength Man page
subsetByFilter Man page
subsetByFilter,ANY,FilterRules-method Man page
subset,DataTable-method Man page
subsetting-utils Man page
substring,Rle-method Man page
substr,Rle-method Man page
summary,FilterMatrix-method Man page
summary,FilterRules-method Man page
summary.Rle Man page
summary,Rle-method Man page
Summary,Rle-method Man page
svn.time Man page
table,Rle-method Man page
table,Vector-method Man page
tabulate,Rle-method Man page
tail Man page
tail.DataTable Man page
tail.Vector Man page
tail,Vector-method Man page
t,HitsList-method Man page
t,Hits-method Man page
to Man page
to,Hits-method Man page
tolower,Rle-method Man page
toupper,Rle-method Man page
union,ANY,Rle-method Man page
union,Hits,Hits-method Man page
union,Rle,ANY-method Man page
union,Rle,Rle-method Man page
union,Vector,Vector-method Man page
unique.DataTable Man page
unique,DataTable-method Man page
unique,Rle-method Man page
unique.Vector Man page
unique,Vector-method Man page
unlist,List-method Man page
unstrsplit Man page
unstrsplit,character-method Man page
unstrsplit,list-method Man page
updateObject,Hits-method Man page
values Man page
values<- Man page
values<-,Vector-method Man page
values,Vector-method Man page
var,Rle,missing-method Man page
var,Rle,Rle-method Man page
Vector Man page
<=,Vector,ANY-method Man page
<,Vector,ANY-method Man page
==,Vector,ANY-method Man page
>=,Vector,ANY-method Man page
>,Vector,ANY-method Man page
!=,Vector,ANY-method Man page
Vector-class Man page
Vector-comparison Man page
Vector-merge Man page
[<-,Vector-method Man page
[,Vector-method Man page
vectorORfactor Man page
vectorORfactor-class Man page
Vector-setops Man page
<=,Vector,Vector-method Man page
<,Vector,Vector-method Man page
==,Vector,Vector-method Man page
>=,Vector,Vector-method Man page
>,Vector,Vector-method Man page
!=,Vector,Vector-method Man page
which.max,Rle-method Man page
which,Rle-method Man page
width,Rle-method Man page
window Man page
window.Vector Man page
window,Vector-method Man page
within,List-method Man page
wmsg Man page
xtabs,DataTable-method Man page
zipdown Man page
zipdown,ANY-method Man page
zipdown,List-method Man page
zipup Man page
zipup,ANY,ANY-method Man page
zipup,Pairs,missing-method Man page

Files

S4Vectors/DESCRIPTION
S4Vectors/NAMESPACE
S4Vectors/NEWS
S4Vectors/R
S4Vectors/R/Annotated-class.R S4Vectors/R/DataFrame-class.R S4Vectors/R/DataTable-class.R S4Vectors/R/FilterRules-class.R S4Vectors/R/Hits-class.R S4Vectors/R/Hits-comparison.R S4Vectors/R/Hits-setops.R S4Vectors/R/HitsList-class.R S4Vectors/R/List-class.R S4Vectors/R/List-comparison.R S4Vectors/R/List-utils.R S4Vectors/R/Pairs-class.R S4Vectors/R/Rle-class.R S4Vectors/R/Rle-utils.R S4Vectors/R/S4-utils.R S4Vectors/R/SimpleList-class.R S4Vectors/R/Vector-class.R S4Vectors/R/Vector-comparison.R S4Vectors/R/Vector-merge.R S4Vectors/R/Vector-setops.R S4Vectors/R/aggregate-methods.R S4Vectors/R/eval-utils.R S4Vectors/R/expand-methods.R S4Vectors/R/int-utils.R S4Vectors/R/isSorted.R S4Vectors/R/logical-utils.R S4Vectors/R/normarg-utils.R S4Vectors/R/shiftApply-methods.R S4Vectors/R/show-utils.R S4Vectors/R/split-methods.R S4Vectors/R/str-utils.R S4Vectors/R/subsetting-utils.R S4Vectors/R/utils.R S4Vectors/R/vector-utils.R S4Vectors/R/zzz.R
S4Vectors/TODO
S4Vectors/build
S4Vectors/build/vignette.rds
S4Vectors/inst
S4Vectors/inst/doc
S4Vectors/inst/doc/HTS_core_package_stack.txt
S4Vectors/inst/doc/RleTricks.R
S4Vectors/inst/doc/RleTricks.Rnw
S4Vectors/inst/doc/RleTricks.pdf
S4Vectors/inst/doc/S4QuickOverview.R
S4Vectors/inst/doc/S4QuickOverview.Rnw
S4Vectors/inst/doc/S4QuickOverview.pdf
S4Vectors/inst/include
S4Vectors/inst/include/S4Vectors_defines.h
S4Vectors/inst/include/S4Vectors_interface.h
S4Vectors/inst/include/_S4Vectors_stubs.c
S4Vectors/inst/unitTests
S4Vectors/inst/unitTests/test_DataFrame-class.R
S4Vectors/inst/unitTests/test_DataTable-class.R
S4Vectors/inst/unitTests/test_FilterRules.R
S4Vectors/inst/unitTests/test_Hits-class.R
S4Vectors/inst/unitTests/test_List-class.R
S4Vectors/inst/unitTests/test_List-utils.R
S4Vectors/inst/unitTests/test_Pairs-class.R
S4Vectors/inst/unitTests/test_Rle-class.R
S4Vectors/inst/unitTests/test_Rle-utils.R
S4Vectors/inst/unitTests/test_Vector-merge.R
S4Vectors/inst/unitTests/test_expand-methods.R
S4Vectors/man
S4Vectors/man/Annotated-class.Rd S4Vectors/man/DataFrame-class.Rd S4Vectors/man/DataTable-class.Rd S4Vectors/man/FilterMatrix-class.Rd S4Vectors/man/FilterRules-class.Rd S4Vectors/man/Hits-class.Rd S4Vectors/man/Hits-comparison.Rd S4Vectors/man/Hits-setops.Rd S4Vectors/man/HitsList-class.Rd S4Vectors/man/List-class.Rd S4Vectors/man/List-utils.Rd S4Vectors/man/Pairs-class.Rd S4Vectors/man/Rle-class.Rd S4Vectors/man/Rle-runstat.Rd S4Vectors/man/Rle-utils.Rd S4Vectors/man/S4Vectors-internals.Rd S4Vectors/man/SimpleList-class.Rd S4Vectors/man/Vector-class.Rd S4Vectors/man/Vector-comparison.Rd S4Vectors/man/Vector-merge.Rd S4Vectors/man/Vector-setops.Rd S4Vectors/man/aggregate-methods.Rd S4Vectors/man/expand-methods.Rd S4Vectors/man/isSorted.Rd S4Vectors/man/shiftApply-methods.Rd S4Vectors/man/split-methods.Rd S4Vectors/man/str-utils.Rd S4Vectors/man/subsetting-utils.Rd S4Vectors/man/zip-methods.Rd
S4Vectors/src
S4Vectors/src/AEbufs.c
S4Vectors/src/DataFrame_class.c
S4Vectors/src/Hits_class.c
S4Vectors/src/List_class.c
S4Vectors/src/R_init_S4Vectors.c
S4Vectors/src/Rle_class.c
S4Vectors/src/Rle_utils.c
S4Vectors/src/S4Vectors.h
S4Vectors/src/SEXP_utils.c
S4Vectors/src/SimpleList_class.c
S4Vectors/src/anyMissing.c
S4Vectors/src/eval_utils.c
S4Vectors/src/hash_utils.c
S4Vectors/src/int_utils.c
S4Vectors/src/logical_utils.c
S4Vectors/src/safe_arithm.c
S4Vectors/src/sort_utils.c
S4Vectors/src/str_utils.c
S4Vectors/src/vector_utils.c
S4Vectors/tests
S4Vectors/tests/run_unitTests.R
S4Vectors/vignettes
S4Vectors/vignettes/RleTricks.Rnw
S4Vectors/vignettes/S4QuickOverview.Rnw
S4Vectors/vignettes/slides.sty

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