annotation-methods: Retrieve the annotation of a 'SNPhood' object.

In SNPhood: SNPhood: Investigate, quantify and visualise the epigenomic neighbourhood of SNPs using NGS data

Description

Specific elements within the annotation slot may also be extracted by using the elements parameter.

Usage

## S4 method for signature 'SNPhood'
annotation(object, elements = NULL, ...)

Arguments

object	Object of class SNPhood
elements	Character. The name of the element(s) in the annotation slot to be extracted. If set to NULL, the full annotation slot is returned.
...	not supported

Value

If only a single value for elements is provided, the element is returned directly. If multiple values are provided, a named list with the requested elements is returned.

Examples

data(SNPhood.o, package="SNPhood")
annotation(SNPhood.o)
annotation(SNPhood.o, elements = "regions")
annotation(SNPhood.o, elements = c("regions", "bins"))

SNPhood documentation built on Nov. 8, 2020, 6:22 p.m.