sample_zero_mscor_cov: Sampling zero multiple miRNA sensitivity covariance matrices

In SPONGE: Sparse Partial Correlations On Gene Expression

Description

Sampling zero multiple miRNA sensitivity covariance matrices

Usage

sample_zero_mscor_cov(m, number_of_solutions, number_of_attempts = 1000,
  gene_gene_correlation = NULL, random_seed = NULL,
  log.level = "ERROR")

Arguments

m	number of miRNAs, i.e. number of columns of the matrix
number_of_solutions	stop after this many instances have been samples
number_of_attempts	give up after that many attempts
gene_gene_correlation	optional, define the correlation of the first two elements, i.e. the genes.
random_seed	A random seed to be used for reproducible results
log.level	the log level, typically set to INFO, set to DEBUG for verbose logging

Value

a list of covariance matrices with zero sensitivity correlation

Examples

sample_zero_mscor_cov(m = 1,
number_of_solutions = 1,
gene_gene_correlation = 0.5)

SPONGE documentation built on Nov. 8, 2020, 5:39 p.m.