This package implements sampling, iteration, and input of FASTQ files. The package includes functions for filtering and trimming reads, and for generating a quality assessment report. Data are represented as DNAStringSet-derived objects, and easily manipulated for a diversity of purposes. The package also contains legacy support for early single-end, ungapped alignment formats.
|Author||Martin Morgan, Michael Lawrence, Simon Anders|
|Bioconductor views||DataImport QualityControl Sequencing|
|Maintainer||Bioconductor Package Maintainer <[email protected]>|
|Package repository||View on Bioconductor|
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