ShortRead-package: FASTQ input and manipulation.
In ShortRead: FASTQ input and manipulation
Description
This package implements sampling, iteration, and input of FASTQ
files. The package includes functions for filtering and trimming
reads, and for generating a quality assessment report. Data are
represented as DNAStringSet-derived objects, and easily manipulated
for a diversity of purposes. The package also contains legacy support
for early single-end, ungapped alignment formats.
Details
See packageDescription('ShortRead')
Author(s)
Maintainer: Martin Morgan <mtmorgan@fhcrc.org>
ShortRead documentation built on Nov. 8, 2020, 8:02 p.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Description
This package implements sampling, iteration, and input of FASTQ files. The package includes functions for filtering and trimming reads, and for generating a quality assessment report. Data are represented as DNAStringSet-derived objects, and easily manipulated for a diversity of purposes. The package also contains legacy support for early single-end, ungapped alignment formats.
Details
See packageDescription('ShortRead')
Author(s)
Maintainer: Martin Morgan <mtmorgan@fhcrc.org>
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.