Nothing
tests/testthat/test_MEME.R
In TFBSTools: Software Package for Transcription Factor Binding Site (TFBS) Analysis
test_that("parseMEMEOutput", {
memeOutput <- file.path(system.file("extdata", package="TFBSTools"),
"meme.output")
ans <- parseMEMEOutput(memeOutput)
expect_equal(length(ans$motifList), 5L)
expect_equivalent(lengths(ans$motifList), c(17L, 5L, 2L, 5L, 2L))
expect_equal(ans$motifEvalues, c(4.1e-09, 2.8e+02, 1.2e+03, 1.4e+03, 1.8e+03))
})
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TFBSTools documentation built on Nov. 8, 2020, 8:14 p.m.
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test_that("parseMEMEOutput", {
memeOutput <- file.path(system.file("extdata", package="TFBSTools"),
"meme.output")
ans <- parseMEMEOutput(memeOutput)
expect_equal(length(ans$motifList), 5L)
expect_equivalent(lengths(ans$motifList), c(17L, 5L, 2L, 5L, 2L))
expect_equal(ans$motifEvalues, c(4.1e-09, 2.8e+02, 1.2e+03, 1.4e+03, 1.8e+03))
})
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Any scripts or data that you put into this service are public.
R Package Documentation
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We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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