plotHeatmap: Plot a heatmap

In TimeSeriesExperiment: Analysis for short time-series data

Description

Generates a heatmap of expression data.

Usage

plotHeatmap(object, num.feat = 200, scale = TRUE,
  feat_desc = "feature", sample_desc = "sample")

Arguments

object	A TimeSeriesExperiment object
num.feat	Number of top most features to use.
scale	Whether to scale the data (by features) before plotting.
feat_desc	One of the column names from feature_data(object) to describe the features.
sample_desc	ne of the column names from sample_data(object) to describe the samples.
...	other parameters ggplot.

Value

Returns a ggplot2 objet.

Examples

data("endoderm_small")
endoderm_small <- normalizeData(endoderm_small)
## Not run: 
    plotHeatmap(endoderm_small)

## End(Not run)

TimeSeriesExperiment documentation built on Nov. 8, 2020, 11:09 p.m.