plotTimeSeriesClusters: Plot (time) series over clusters.
In TimeSeriesExperiment: Analysis for short time-series data

Plots timecourse (aggregated over replicates) feature data faceted by computed clusters and experimental group.

1 2	plotTimeSeriesClusters(object, features = NULL, transparency = 0.5, ncol = 4, scales = "free")

`object`	A `TimeSeriesExperiment` object.
`features`	A vector of names of selected features to plot.
`transparency`	transparency of trajectory lines.
`ncol`	number of columns in the factet plot.
`scales`	character scalar indecating facet scales, by default "free".

ggplot object

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data("endoderm_small")
endoderm_small <- clusterTimeSeries(endoderm_small)
plotTimeSeriesClusters(endoderm_small)

TimeSeriesExperiment documentation built on Nov. 8, 2020, 11:09 p.m.

TimeSeriesExperiment index

README.md Cop1 role in pro-inflammatory response

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