| .gene2window |
Source code
|
| .is.dc |
Source code
|
| .lib_fname |
Source code
|
| .onAttach |
Source code
|
| .plotTVData |
Source code
|
| .prepare_flist |
Source code
|
| .row_z_score |
Source code
|
| .slice1 |
Source code
|
| .slice1T |
Source code
|
| .sliceN |
Source code
|
| .sliceNT |
Source code
|
| .test |
Source code
|
| .tvStats |
Source code
|
| DensityContainer-class |
Man page
|
| TVResults-class |
Man page
|
| TransView |
Man page
|
| TransView-package |
Man page
|
| annotatePeaks |
Man page
Source code
|
| chromosomes |
Man page
|
| chromosomes,DensityContainer-method |
Man page
|
| class:DensityContainer |
Man page
|
| class:TVResults |
Man page
|
| cluster_order |
Man page
|
| cluster_order,TVResults-method |
Man page
|
| clusters |
Man page
|
| clusters,TVResults-method |
Man page
|
| collapsed |
Man page
|
| collapsed,DensityContainer-method |
Man page
|
| compression |
Man page
|
| compression,DensityContainer-method |
Man page
|
| data_pointer |
Man page
|
| data_pointer,DensityContainer-method |
Man page
|
| env |
Man page
|
| env,DensityContainer-method |
Man page
|
| ex_name |
Man page
|
| ex_name,DensityContainer-method |
Man page
|
| ex_name<- |
Man page
|
| ex_name<-,DensityContainer-method |
Man page
|
| filtered |
Man page
|
| filtered,DensityContainer-method |
Man page
|
| filtered_reads |
Man page
|
| filtered_reads,DensityContainer-method |
Man page
|
| fmapmass |
Man page
|
| fmapmass,DensityContainer-method |
Man page
|
| gcoverage |
Man page
|
| gcoverage,DensityContainer-method |
Man page
|
| gsize |
Man page
|
| gsize,DensityContainer-method |
Man page
|
| gtf2gr |
Man page
Source code
|
| histogram |
Man page
|
| histogram,DensityContainer-method |
Man page
|
| histogram-methods |
Man page
|
| lcoverage |
Man page
|
| lcoverage,DensityContainer-method |
Man page
|
| lmaxScore |
Man page
|
| lmaxScore,DensityContainer-method |
Man page
|
| lowqual |
Man page
|
| lowqual,DensityContainer-method |
Man page
|
| lsize |
Man page
|
| lsize,DensityContainer-method |
Man page
|
| macs2gr |
Man page
Source code
|
| maxScore |
Man page
|
| maxScore,DensityContainer-method |
Man page
|
| meltPeak |
Man page
|
| neg |
Man page
|
| neg,DensityContainer-method |
Man page
|
| nreads |
Man page
|
| nreads,DensityContainer-method |
Man page
|
| origin |
Man page
|
| origin,DensityContainer-method |
Man page
|
| paired |
Man page
|
| paired,DensityContainer-method |
Man page
|
| paired_reads |
Man page
|
| paired_reads,DensityContainer-method |
Man page
|
| parameters |
Man page
|
| parameters,TVResults-method |
Man page
|
| parseReads |
Man page
Source code
|
| peak2tss |
Man page
Source code
|
| plotTV |
Man page
|
| plotTVData |
Man page
|
| plotTVData,TVResults |
Man page
|
| plotTVData,TVResults-method |
Man page
|
| plotTVData-methods |
Man page
|
| pos |
Man page
|
| pos,DensityContainer-method |
Man page
|
| proper_pairs |
Man page
|
| proper_pairs,DensityContainer-method |
Man page
|
| readthrough_pairs |
Man page
|
| readthrough_pairs,DensityContainer-method |
Man page
|
| rmTV |
Man page
Source code
|
| rmTV,DensityContainer-method |
Man page
|
| rmTV-methods |
Man page
|
| scores_peaks |
Man page
|
| scores_peaks,TVResults-method |
Man page
|
| scores_rna |
Man page
|
| scores_rna,TVResults-method |
Man page
|
| setTV |
Source code
|
| setTVResults |
Source code
|
| show,DensityContainer-method |
Man page
|
| show,TVResults-method |
Man page
|
| size |
Man page
|
| size,DensityContainer-method |
Man page
|
| slice1 |
Man page
|
| slice1,DensityContainer,character,numeric,numeric-method |
Man page
|
| slice1-methods |
Man page
|
| slice1T |
Man page
|
| slice1T,DensityContainer,character-method |
Man page
|
| slice1T-methods |
Man page
|
| sliceN |
Man page
|
| sliceN,DensityContainer-method |
Man page
|
| sliceN-methods |
Man page
|
| sliceNT |
Man page
|
| sliceNT,DensityContainer,character-method |
Man page
|
| sliceNT-methods |
Man page
|
| spliced |
Man page
|
| spliced,DensityContainer-method |
Man page
|
| spliced<- |
Man page
|
| spliced<-,DensityContainer-method |
Man page
|
| strands |
Man page
|
| strands,DensityContainer-method |
Man page
|
| summaryTV |
Man page
|
| summaryTV,TVResults-method |
Man page
|
| tvStats |
Man page
|
| tvStats,DensityContainer-method |
Man page
|
| tvStats-methods |
Man page
|
