makeColData: generate a colData component corresponding to a mongodb

In TxRegInfra: Metadata management for multiomic specification of transcriptional regulatory networks

Description

generate a colData component corresponding to a mongodb

Usage

makeColData(url = URL_txregInAWS(), db = "txregnet",
  formatter = basicFormatter)

Arguments

url	character(1) url for mongodb
db	character(1) database name
formatter	a function that takes in a character vector and returns a DataFrame with number of rows equal to the length of input

Value

a DataFrame instance

Examples

if (verifyHasMongoCmd()) makeColData()

TxRegInfra documentation built on Nov. 8, 2020, 5:15 p.m.