tests/testthat/test_estimateSizeFactors.R

data("ExampleData")
conditions <- factor(c(rep('C1',3), rep('C2', 3)))
XB <- XBSeqDataSet(Observed, Background, conditions)
XB <- estimateRealCount(XB)
expect_error(estimateSCV(XB, method='pooled', sharingMode='maximum', fitType='local'))
expect_error(counts(XB, normalized = TRUE))

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XBSeq documentation built on May 2, 2018, 4 a.m.