getBioassaySetByCids: Create 'bioassaySet' sparse matrix object with activity data...
In bioassayR: Cross-target analysis of small molecule bioactivity

Description Usage Arguments Value Author(s) Examples

Takes a list of compounds, and creates a bioassaySet sparse matrix object with the activity data for these compounds only, not including activity data from other compounds in the same assays.

1	getBioassaySetByCids(database, cids)

`database`	A `BioassayDB` database to query.
`cids`	One or more compounds IDs of interest.

A bioassaySet object containing data from the specified cids.

Tyler William H Backman

## connect to a test database
extdata_dir <- system.file("extdata", package="bioassayR")
sampleDatabasePath <- file.path(extdata_dir, "sampleDatabase.sqlite")
sampleDB <- connectBioassayDB(sampleDatabasePath)

## retrieve activity data on 3 compounds 
activitySet <- getBioassaySetByCids(sampleDB, c("2244","3715","237"))
activitySet

## disconnect from sample database
disconnectBioassayDB(sampleDB)