sceCeldaCGGridSearch: sceCeldaCGGridSearch
In celda: CEllular Latent Dirichlet Allocation
Description
Usage
Format
Examples
Description
A SingleCellExperiment object containing the
results of running selectFeatures and celdaGridSearch on
celdaCGSim.
Usage
1
Format
A SingleCellExperiment object
Examples
1
2
3
4
5
6
7
8
9
10
data(celdaCGSim)
sce <- selectFeatures(celdaCGSim$counts)
sceCeldaCGGridSearch <- celdaGridSearch(sce,
model = "celda_CG",
paramsTest = list(K = seq(4, 6), L = seq(9, 11)),
paramsFixed = list(sampleLabel = celdaCGSim$sampleLabel),
bestOnly = TRUE,
nchains = 1,
cores = 1,
verbose = FALSE)
celda documentation built on Nov. 8, 2020, 8:24 p.m.
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Description Usage Format Examples
Description
A SingleCellExperiment object containing the results of running selectFeatures and celdaGridSearch on celdaCGSim.
Usage
1 |
Format
A SingleCellExperiment object
Examples
1 2 3 4 5 6 7 8 9 10 | data(celdaCGSim)
sce <- selectFeatures(celdaCGSim$counts)
sceCeldaCGGridSearch <- celdaGridSearch(sce,
model = "celda_CG",
paramsTest = list(K = seq(4, 6), L = seq(9, 11)),
paramsFixed = list(sampleLabel = celdaCGSim$sampleLabel),
bestOnly = TRUE,
nchains = 1,
cores = 1,
verbose = FALSE)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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