getFragmentsPerPeak: getFragmentsPerPeak

Description Usage Arguments Value Methods (by class) See Also Examples

Description

getFragmentsPerPeak

Usage

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getFragmentsPerPeak(object)

## S4 method for signature 'SummarizedExperiment'
getFragmentsPerPeak(object)

## S4 method for signature 'MatrixOrmatrix'
getFragmentsPerPeak(object)

Arguments

object

SummarizedExperiment, matrix, or Matrix object

Value

vector with sum across rows of counts assay within chromVARCounts

Methods (by class)

See Also

getFragmentsPerSample, getTotalFragments

Examples

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# Load very small example counts (already filtered)
data(mini_counts, package = "chromVAR")

frags_per_peak <- getFragmentsPerPeak(mini_counts)

chromVAR documentation built on Nov. 8, 2020, 6:46 p.m.