combinedMultiHMM: Combined multivariate HMM object

Description Value See Also

Description

The multivariate HMM object is output of the function combineMultivariates and is a list() with various entries. The class() attribute of this list was set to "combinedMultiHMM". For a given hmm, the entries can be accessed with the list operators 'hmm[[]]' or 'hmm$'.

Value

A list() with the following entries:

bins

A GRanges object containing genomic bin coordinates and human readable combinations for the combined multiHMM objects.

segments

Same as bins, but consecutive bins with the same state are collapsed into segments.

segments.per.condition

A list with segments for each condition separately.

See Also

combineMultivariates, uniHMM, multiHMM


chromstaR documentation built on May 31, 2017, 11:32 a.m.