Description Usage Arguments Value Author(s) Examples

View source: R/frequencyAnalysis.R

Get the genomewide frequency of each combinatorial state.

1 | ```
genomicFrequencies(multi.hmm, combinations = NULL, per.mark = FALSE)
``` |

`multi.hmm` |
A |

`combinations` |
A vector with combinations for which the frequency will be calculated. If |

`per.mark` |
Set to |

A table with frequencies of each combinatorial state.

Aaron Taudt

1 2 3 4 5 | ```
## Get an example multiHMM
file <- system.file("data","multivariate_mode-combinatorial_condition-SHR.RData",
package="chromstaR")
model <- get(load(file))
genomicFrequencies(model)
``` |

chromstaR documentation built on July 20, 2018, 6 p.m.

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