multivariateSegmentation: Multivariate segmentation

Description Usage Arguments Value

View source: R/segmentation.R

Description

Make segmentation from bins for a multiHMM object.

Usage

1
multivariateSegmentation(bins, column2collapseBy = "state")

Arguments

bins

A GRanges with binned read counts.

column2collapseBy

The number of the column which will be used to collapse all other inputs. If a set of consecutive bins has the same value in this column, they will be aggregated into one bin with adjusted genomic coordinates.

Value

A GRanges with segmented regions.


chromstaR documentation built on Nov. 17, 2017, 9:01 a.m.