multivariateSegmentation: Multivariate segmentation
In chromstaR: Combinatorial and Differential Chromatin State Analysis for ChIP-Seq Data
Description
Usage
Arguments
Value
Description
Make segmentation from bins for a multiHMM object.
Usage
1
multivariateSegmentation(bins, column2collapseBy = "state")
Arguments
bins
A GRanges-class with binned read counts.
column2collapseBy
The number of the column which will be used to collapse all other inputs. If a set of consecutive bins has the same value in this column, they will be aggregated into one bin with adjusted genomic coordinates.
Value
A GRanges-class with segmented regions.
chromstaR documentation built on Nov. 8, 2020, 8:29 p.m.
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Description Usage Arguments Value
Description
Make segmentation from bins for a multiHMM object.
Usage
1 | multivariateSegmentation(bins, column2collapseBy = "state")
|
Arguments
bins |
A |
column2collapseBy |
The number of the column which will be used to collapse all other inputs. If a set of consecutive bins has the same value in this column, they will be aggregated into one bin with adjusted genomic coordinates. |
Value
A GRanges-class with segmented regions.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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