Multivariate segmentation

Description

Make segmentation from bins for a multiHMM object.

Usage

1
multivariateSegmentation(bins, column2collapseBy = "state")

Arguments

bins

A GRanges with binned read counts.

column2collapseBy

The number of the column which will be used to collapse all other inputs. If a set of consecutive bins has the same value in this column, they will be aggregated into one bin with adjusted genomic coordinates.

Value

A GRanges with segmented regions.

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