df_for_coords: Construct a data frame of coordinate info from coordinate...
In cicero: Precict cis-co-accessibility from single-cell chromatin accessibility data
Description
Usage
Arguments
Details
Value
Examples
Description
Construct a data frame of coordinate info from coordinate strings
Usage
1
df_for_coords(coord_strings)
Arguments
coord_strings
A list of coordinate strings (each like
"chr1:500000-1000000")
Details
Coordinate strings consist of three pieces of information:
chromosome, start, and stop. These pieces of information can be separated
by the characters ":", "_", or "-". Commas will be removed, not used as
separators (ex: "chr18:8,575,097-8,839,855" is ok).
Value
data.frame with three columns, chromosome, starting base pair and
ending base pair
Examples
1
df_for_coords(c("chr1:2,039-30,239", "chrX:28884:101293"))
cicero documentation built on Dec. 10, 2020, 2 a.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Description Usage Arguments Details Value Examples
Description
Construct a data frame of coordinate info from coordinate strings
Usage
1 | df_for_coords(coord_strings)
|
Arguments
coord_strings |
A list of coordinate strings (each like "chr1:500000-1000000") |
Details
Coordinate strings consist of three pieces of information: chromosome, start, and stop. These pieces of information can be separated by the characters ":", "_", or "-". Commas will be removed, not used as separators (ex: "chr18:8,575,097-8,839,855" is ok).
Value
data.frame with three columns, chromosome, starting base pair and ending base pair
Examples
1 | df_for_coords(c("chr1:2,039-30,239", "chrX:28884:101293"))
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.