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This package implements a Naive Bayes classifier for accurate identification of polyadenylation sites (pA sites) from oligodT based 3 prime end sequencing such as PAS-Seq, PolyA-Seq and RNA-Seq. The classifer is highly accurate and outperforms heuristic methods.
Package details |
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Author | Sarah Sheppard, Jianhong Ou, Nathan Lawson, Lihua Julie Zhu |
Bioconductor views | GeneRegulation Genetics SequenceMatching Sequencing |
Maintainer | Jianhong Ou <Jianhong.Ou@duke.edu>; Lihua Julie Zhu <Julie.Zhu@umassmed.edu> |
License | GPL-2 |
Version | 1.28.0 |
Package repository | View on Bioconductor |
Installation |
Install the latest version of this package by entering the following in R:
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