Files in clipper

Gene Set Analysis Exploiting Pathway Topology

COPYING

NAMESPACE

DESCRIPTION

build/vignette.rds

R/covariance.R R/cliqueMixedTest.R R/hotelling4mean.R R/cliqueMeanTest.R R/pathwayTest.R R/easyLook.R R/hotePaired.R R/getJunctionTreePaths.R R/clipper.R R/prunePaths.R R/dag-graph.R R/getExpression.R R/graph-theory.R R/cliquePairedTest.R R/removeSelfLoops.R R/plotInCytoscape.R R/multiTest.R R/permutation.R R/easyClip.R R/hotelling4qpipf.R R/cliqueHandling.R R/cliqueVarianceTest.R R/removeNArows.R R/clipperBackbone.R R/getGraphEntryGenes.R R/deleteEdge.R

vignettes/Cytoscape.png

vignettes/clipper.Rnw

man/getJunctionTreePaths.Rd man/cliqueVarianceTest.Rd man/cliqueMeanTest.Rd man/plotInCytoscape.Rd man/easyLook.Rd man/pathwayTest.Rd man/cliqueMixedTest.Rd man/prunePaths.Rd man/clipper.Rd man/cliquePairedTest.Rd man/deleteEdge.Rd man/clipperAllRoots.Rd man/nameCliques.Rd man/getGraphEntryGenes.Rd man/easyClip.Rd tests/runTests.R inst/doc/clipper.pdf inst/doc/clipper.R

inst/doc/clipper.Rnw

inst/unitTests/test_deleteEdge.R inst/unitTests/test_cliqueVarianceTest.R inst/unitTests/test_getJunctionTreePaths.R inst/unitTests/test_cliqueMeanTest.R inst/unitTests/test_prunePaths.R inst/unitTests/test_pathQ-paired.R inst/unitTests/test_clipper.R inst/unitTests/test_patQ.R inst/unitTests/test_cliquePairedTest.R inst/unitTests/test_getGraphEntryGenes.R

clipper documentation built on Nov. 8, 2020, 6:18 p.m.