cn.farms: cn.farms
In cn.farms: cn.FARMS - factor analysis for copy number estimation
Description
Usage
Arguments
Value
Author(s)
Examples
Description
Wrapper for the cn.farms algorithm
Usage
1
cn.farms(filenames, cores = 1, runtype = "bm")
Arguments
filenames
the absolute filepaths of the CEL files.
cores
number of parallel instances.
runtype
either ff or bm.
Value
An instance of ExpressionSet
containing the results of the analysis.
Author(s)
Djork-Arne Clevert okko@clevert.de and
Andreas Mitterecker mitterecker@bioinf.jku.at
Examples
1
2
3
4
5
6
7
## Not run:
require('hapmapsnp6')
celDir <- system.file('celFiles', package = 'hapmapsnp6')
filenames <- dir(path = celDir, full.names = TRUE)
cn.farms(filenames = filenames)
## End(Not run)
cn.farms documentation built on Nov. 8, 2020, 7:59 p.m.
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Description Usage Arguments Value Author(s) Examples
Description
Wrapper for the cn.farms algorithm
Usage
1 | cn.farms(filenames, cores = 1, runtype = "bm")
|
Arguments
filenames |
the absolute filepaths of the CEL files. |
cores |
number of parallel instances. |
runtype |
either ff or bm. |
Value
An instance of ExpressionSet
containing the results of the analysis.
Author(s)
Djork-Arne Clevert okko@clevert.de and Andreas Mitterecker mitterecker@bioinf.jku.at
Examples
1 2 3 4 5 6 7 | ## Not run:
require('hapmapsnp6')
celDir <- system.file('celFiles', package = 'hapmapsnp6')
filenames <- dir(path = celDir, full.names = TRUE)
cn.farms(filenames = filenames)
## End(Not run)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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