fragLengCorr: Does a fragment length correction
In cn.farms: cn.FARMS - factor analysis for copy number estimation
Description
Usage
Arguments
Value
Author(s)
Examples
Description
Does a fragment length correction
Usage
1
fragLengCorr(object, runtype = "ff", saveFile = "slDataFlc", ...)
Arguments
object
An instance of
ExpressionSet
runtype
Mode how the results are saved. Possible values are ff or bm.
...
Further parameters passed to the correction method.
saveFile
Name of the file to save.
Value
An instance of
ExpressionSet.
Author(s)
Djork-Arne Clevert okko@clevert.de and
Andreas Mitterecker mitterecker@bioinf.jku.at
Examples
1
2
load(system.file("exampleData/slData.RData", package = "cn.farms"))
slDataFlc <- fragLengCorr(slData)
cn.farms documentation built on Nov. 8, 2020, 7:59 p.m.
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Description Usage Arguments Value Author(s) Examples
Description
Does a fragment length correction
Usage
1 | fragLengCorr(object, runtype = "ff", saveFile = "slDataFlc", ...)
|
Arguments
object |
An instance of
|
runtype |
Mode how the results are saved. Possible values are ff or bm. |
... |
Further parameters passed to the correction method. |
saveFile |
Name of the file to save. |
Value
An instance of
ExpressionSet.
Author(s)
Djork-Arne Clevert okko@clevert.de and Andreas Mitterecker mitterecker@bioinf.jku.at
Examples
1 2 | load(system.file("exampleData/slData.RData", package = "cn.farms"))
slDataFlc <- fragLengCorr(slData)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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