API for cn.mops
cn.mops - Mixture of Poissons for CNV detection in NGS data

Global functions
.cn.mopsC Source code
.cn.mopsCE Source code
.convertToFastSegRes Source code
.makeLogRatios Source code
.onLoad Source code
.onUnload Source code
.referencecn.mops Source code
.replaceNames Source code
.segPlot Source code
.segmentation Source code
.singlecn.mops Source code
.statmod Source code
CNVDetectionResult Man page
CNVDetectionResult-class Man page Man page
CNVRanges Man page
CnvDetectionResult Man page
X Man page
XRanges Man page
calcFractionalCopyNumbers Man page
calcFractionalCopyNumbers,CNVDetectionResult-method Man page Man page
calcIntegerCopyNumbers Man page
calcIntegerCopyNumbers,CNVDetectionResult-method Man page Man page
cn.mops Man page Source code
cnvdetectionresult Man page
cnvr Man page
cnvr,CNVDetectionResult-method Man page Man page
cnvs Man page
cnvs,CNVDetectionResult-method Man page Man page
exomeCounts Man page
exomecn.mops Man page Source code
getReadCountsFromBAM Man page Source code
getSegmentReadCountsFromBAM Man page Source code
gr Man page
gr,CNVDetectionResult-method Man page Man page
haplocn.mops Man page Source code
haplocn.mopsC Source code
haplocn.mopsCE Source code
individualCall Man page
individualCall,CNVDetectionResult-method Man page Man page
iniCall Man page
iniCall,CNVDetectionResult-method Man page Man page
integerCopyNumber Man page
integerCopyNumber,CNVDetectionResult-method Man page Man page
localAssessments Man page
localAssessments,CNVDetectionResult-method Man page Man page
makeRobustCNVR Man page
makeRobustCNVR,CNVDetectionResult-method Man page Man page
normalizeChromosomes Man page Source code
normalizeGenome Man page Source code
normalizedData Man page
normalizedData,CNVDetectionResult-method Man page Man page
params Man page
params,CNVDetectionResult-method Man page Man page
plot,CNVDetectionResult,missing-method Man page
plot-methods Man page
posteriorProbs Man page
posteriorProbs,CNVDetectionResult-method Man page Man page
referencecn.mops Man page Source code
sampleNames Man page
sampleNames,CNVDetectionResult-method Man page Man page
segment Man page Source code
segmentation Man page
segmentation,CNVDetectionResult-method Man page Man page
segplot Man page
segplot,CNVDetectionResult-method Man page Man page
show,CNVDetectionResult-method Man page
show-methods Man page
singlecn.mops Man page Source code
cn.mops documentation built on Nov. 8, 2020, 5:59 p.m.