localAssessments: This generic function returns the local assessments, i.e....
In cn.mops: cn.mops - Mixture of Poissons for CNV detection in NGS data
Description
Arguments
Value
Author(s)
Examples
Description
This generic function returns the local assessments, i.e.
signed individual informative/non-informative calls, of a
CNV detection method stored in an instance of
CNVDetectionResult-class. For other CNV
detection methods this can be (log-) ratios or z-scores.
Arguments
object
An instance of "CNVDetectionResult"
Value
localAssessments returns a "GRanges" object
containing the local assessments.
Author(s)
Guenter Klambauer klambauer@bioinf.jku.at
Examples
1
2
3
data(cn.mops)
r <- cn.mops(X[1:100,1:5])
localAssessments(r)
cn.mops documentation built on Nov. 8, 2020, 5:59 p.m.
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Description Arguments Value Author(s) Examples
Description
This generic function returns the local assessments, i.e.
signed individual informative/non-informative calls, of a
CNV detection method stored in an instance of
CNVDetectionResult-class. For other CNV
detection methods this can be (log-) ratios or z-scores.
Arguments
object |
An instance of "CNVDetectionResult" |
Value
localAssessments returns a "GRanges" object
containing the local assessments.
Author(s)
Guenter Klambauer klambauer@bioinf.jku.at
Examples
1 2 3 | data(cn.mops)
r <- cn.mops(X[1:100,1:5])
localAssessments(r)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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