This generic function returns the informative/non-informative call of a CNV detection method stored in an instance of CNVDetectionResult-class. The I/NI call is a measure for a genomic segment across all samples, whether this segment is a CNV region (informative) or a normal genomic region (non-informative).

Description

This generic function returns the informative/non-informative call of a CNV detection method stored in an instance of CNVDetectionResult-class. The I/NI call is a measure for a genomic segment across all samples, whether this segment is a CNV region (informative) or a normal genomic region (non-informative).

Usage

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## S4 method for signature 'CNVDetectionResult'
iniCall(object)

Arguments

object

An instance of "CNVDetectionResult"

Value

iniCall returns a "GRanges" object containing the individual calls.

Author(s)

Guenter Klambauer klambauer@bioinf.jku.at

Examples

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data(cn.mops)
r <- cn.mops(X[1:100,1:5])
iniCall(r)

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