plot: Plots a CNVDetectionResult

Description Usage Arguments Value Author(s)

Description

Plots read counts, call values and CNV calls in an identified CNV region.

Usage

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## S4 method for signature 'CNVDetectionResult,missing'
plot(x,
             which,margin=c(10,10),toFile=FALSE)

Arguments

x

An instance of "CNVDetectionResult"

which

The index of the CNV region to be plotted.

margin

Vector of two positive integers that states how many segments left and right of the CNV region should be included in the plot. Default = c(10,10).

toFile

Logical value whether the output should be plotted to a file. Default = FALSE.

Value

Generates a CNV calling plot.

Author(s)

Guenter Klambauer [email protected]


cn.mops documentation built on Nov. 17, 2017, 1:05 p.m.