Description Usage Arguments Value Author(s) References See Also Examples
View source: R/BiofeatureGraphics.R
Create one track of the genes in the genomic regions of interest from EMSEMBL using the Gviz bioconductor package
1 | genes_ENSEMBL(gen, chr, start, end, showId=FALSE,title="genes (ENSEMBL)")
|
gen |
the name of the genome |
chr |
the chromosome of interest |
start |
the first position in the region of interest (the smallest value) |
end |
the last position in the region of interest (the largest value) |
showId |
Show the ID of the genetic elements |
title |
Name of tracks |
A BiomartGeneRegionTrack object of Gviz
Tiphaine Martin
http://bioconductor.org/packages/release/bioc/html/Gviz.html
http://genome-euro.ucsc.edu/cgi-bin/hgTrackUi?hgsid=202839739_2hYQ1BAOuBMAR620GjrtdrFAy6dn&c=chr6&g=ensGene
ISCA_UCSC
, GWAScatalog_UCSC
, knownGenes_UCSC
,
genesName_ENSEMBL
, GeneReviews_UCSC
, GAD_UCSC
, xenorefGenes_UCSC
, transcript_ENSEMBL
,
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